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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10788085_10789246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10788085 - 10789246

Intron Length:

1162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTTACT

Flanking Amino Acid:

GSKLSTLLNHNNDTEDEERL

Intron Amino Acid Position:

1048

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

80.4

27.8

Major BPS

100

1.24

0.5

100

Major PPT

82.6

0.73

0.8

31.6

Minor 5ss

41.7

-0.9

57.1

40.8

Minor BPS

72.3

0.78

1.9

93.91

33.3

Associated Gene:

Gene:

NIPBL

Ensembl Gene ID:

ENSAPLG00000008108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008820

10753873 - 10861034

107162

ENSAPLT00000008435

10753873 - 10861034

107162