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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11194538_11207519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11194538 - 11207519

Intron Length:

12982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTATTATTAAAA

Flanking Amino Acid:

PLSPTERCCAERSVLAHPTF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

84.9

0.78

0.8

76.9

36.7

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

63.1

0.41

1.7

74.75

35.9

Associated Gene:

Gene:

RANBP3L

Ensembl Gene ID:

ENSAPLG00000008111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008418

11194357 - 11231455

37099

ENSAPLT00000008414

11194357 - 11233895

39539