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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11218848_11219927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11218848 - 11219927

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAG

U12 Branch Point Sequence:

TTTTCCCCTACA

Flanking Amino Acid:

IESFQVSPQTKTALLRNTTL

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

80.8

33.6

Major BPS

58.8

0.22

1.6

Major PPT

87.2

0.84

0.7

81.3

Minor 5ss

44.7

-0.6

2.9

40.7

Minor BPS

53.7

0.11

2.2

77.11

39.2

Associated Gene:

Gene:

RANBP3L

Ensembl Gene ID:

ENSAPLG00000008111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008418

11194357 - 11231455

37099

ENSAPLT00000008414

11194357 - 11233895

39539