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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11221069_11221653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11221069 - 11221653

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTATTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATCTTCTTATTT

Flanking Amino Acid:

NKCGMLQSRLIMRNQGSLRL

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

87.4

26.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

82.8

0.74

0.7

81.7

28.7

Minor 5ss

41.1

-1

3.2

58.9

39.4

Minor BPS

64.4

0.53

1.6

77.4

39.8

Associated Gene:

Gene:

RANBP3L

Ensembl Gene ID:

ENSAPLG00000008111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008418

11194357 - 11231455

37099

ENSAPLT00000008414

11194357 - 11233895

39539