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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11258_11391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11258 - 11391

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAA

U12 Branch Point Sequence:

TGCTGTTTTACA

Flanking Amino Acid:

LGILLLFLLFRRKHSSSKPS

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

1.1

36.1

Major BPS

52.9

0.07

1.4

64.5

42.8

Major PPT

81.8

0.72

0.9

75.5

38.4

Minor 5ss

35.7

-1.6

2.6

42.8

44.1

Minor BPS

49.3

-0

2.1

63.48

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005719

2781 - 13437

10657