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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11282163_11283142_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11282163 - 11283142

Intron Length:

980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTAGTAACC

Flanking Amino Acid:

SIGNPQFKTMKPLRVQHMDL

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.9

0.79

0.7

76.7

31.9

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

53.5

0.09

2.2

73.51

37.2

Associated Gene:

Gene:

SKP2

Ensembl Gene ID:

ENSAPLG00000007705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034022

11274121 - 11285684

11564

ENSAPLT00000020112

11274121 - 11285684

11564

ENSAPLT00000008015

11275705 - 11285734

10030