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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11296629_11297498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11296629 - 11297498

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTGTTTTGAAG

Flanking Amino Acid:

VAVNPKFNLQWNQLQTIGIA

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

76.9

31.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

75.1

0.56

1.1

75.7

37.8

Minor 5ss

34.2

-1.8

3.5

44.1

44.7

Minor BPS

53.4

-0

1.6

62.4

40.1

Associated Gene:

Gene:

LMBRD2

Ensembl Gene ID:

ENSAPLG00000007368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007681

11285772 - 11315631

29860