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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11305282_11307077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11305282 - 11307077

Intron Length:

1796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCGCTTTTACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AATTTCTTATTT

Flanking Amino Acid:

VVILCIATYFSLGTRCLNLL

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.7

0.58

0.9

69.6

40.4

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

66.2

0.59

1.5

79.09

37.2

Associated Gene:

Gene:

LMBRD2

Ensembl Gene ID:

ENSAPLG00000007368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007681

11285772 - 11315631

29860