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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11325886_11327165_F

Intron Information:

Intron Rank:

136828

Intron Class:

major

Intron Phase:

Intron Coordinates:

11325886 - 11327165

Intron Length:

1280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTGCCTGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

85.3

0.79

0.6

84.7

23.2

Minor 5ss

33.8

-1.8

38.1

42.1

Minor BPS

53.6

0.19

2.1

72.68

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023822

11325798 - 11336203

10406