Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11357672_11359023_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11357672 - 11359023

Intron Length:

1352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTATT

5'SS Class:

major

3'SS Sequence:

CTTTGCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CCACTGTTAACT

Flanking Amino Acid:

LEQLCRKPKNNFDISFNPES

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

85.6

30.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

76.3

0.59

0.9

70.2

35.4

Minor 5ss

50.8

0.03

2.5

73.1

36.3

Minor BPS

49.3

0.03

2.1

65.33

45.2

Associated Gene:

Gene:

IL7R

Ensembl Gene ID:

ENSAPLG00000007308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026411

11357168 - 11371479

14312

ENSAPLT00000007582

11357168 - 11371561

14394