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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11380928_11382073_R

Intron Information:

Intron Rank:

132002

Intron Class:

major

Intron Phase:

Intron Coordinates:

11380928 - 11382073

Intron Length:

1146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTATTTTTATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.8

0.8

0.7

84.6

30.3

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

60.2

0.32

1.6

68.32

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020517

11380130 - 11383289

3160

ENSAPLT00000026798

11380130 - 11382391

2262