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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11405697_11409292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11405697 - 11409292

Intron Length:

3596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTATGTGGG

5'SS Class:

major

3'SS Sequence:

ACTTGCTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

AACATTAGAACT

Flanking Amino Acid:

HIHRKEESSLKSAGAFPYID

Intron Amino Acid Position:

1508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.1

54.5

42.6

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

68.4

0.41

65.5

40.5

Minor 5ss

40.7

-1

3.2

54.2

44.5

Minor BPS

44.7

-0.3

1.6

57.83

38.6

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007366

11404588 - 11488708

84121