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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11415951_11432441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11415951 - 11432441

Intron Length:

16491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTGATT

Flanking Amino Acid:

HKQFLQVAPKGFIYKKVFID

Intron Amino Acid Position:

1325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.2

0.64

0.9

79.1

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

69.2

0.68

1.5

87.65

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007366

11404588 - 11488708

84121