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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11422049_11422150_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11422049 - 11422150

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAGA

5'SS Class:

strong_major

3'SS Sequence:

TACTATTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TACTTTTTACTA

Flanking Amino Acid:

WSMLKLELYNRFQNIQTLTW

Intron Amino Acid Position:

1894

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

79.2

0.66

0.8

77.3

36.3

Minor 5ss

32.9

-1.9

2.9

41.2

44.6

Minor BPS

55.6

0.17

1.6

63.03

38.3

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007512

11421673 - 11488708

67036