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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11422876_11422986_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11422876 - 11422986

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

CCAGATTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GTTTCCATATTG

Flanking Amino Acid:

YPAIVLHLSKDSRASNRQKV

Intron Amino Acid Position:

1714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

47.6

-0.1

1.2

44.4

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

-0

65.24

42.6

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007512

11421673 - 11488708

67036