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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11424153_11432441_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11424153 - 11432441

Intron Length:

8289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AAGCAATTTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

GTAGCCATAAGA

Flanking Amino Acid:

HKQFLQVAPKGKSNSSSKRE

Intron Amino Acid Position:

1325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

52.6

0.06

1.2

49.3

42.2

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

48.7

-0.1

62.04

43.6

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007512

11421673 - 11488708

67036