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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11437345_11440434_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11437345 - 11440434

Intron Length:

3090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTTTTGTTT

5'SS Class:

weak_major

3'SS Sequence:

ACTGTCTTGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

ATTTCAAAAAAC

Flanking Amino Acid:

VTAVSDMVRNCLCADTQLPS

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

0.01

1.2

59.1

39.9

Major BPS

0.79

0.8

83.7

25.7

Major PPT

49.5

-0

1.8

61.8

43.9

Minor 5ss

47.6

-0.2

3.1

70.1

40.6

Minor BPS

45.7

-0.3

2.2

64.69

40.1

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007512

11421673 - 11488708

67036

ENSAPLT00000007366

11404588 - 11488708

84121