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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11444312_11447658_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11444312 - 11447658

Intron Length:

3347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATATTT

Flanking Amino Acid:

TKAELHQRVTDLRDVLWDIC

Intron Amino Acid Position:

985

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

73.6

33.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

42.4

-0.8

2.9

45.5

Minor BPS

53.4

0.19

1.9

77.99

38.5

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007512

11421673 - 11488708

67036

ENSAPLT00000007366

11404588 - 11488708

84121