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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11451364_11452201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11451364 - 11452201

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTTGC

5'SS Class:

strong_major

3'SS Sequence:

ATGATTTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AAAATTTTAATA

Flanking Amino Acid:

IDLVRDQVLHRISGFLDTWP

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.9

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

0.9

70.1

40.6

Minor 5ss

46.6

-0.3

2.5

61.6

43.3

Minor BPS

58.2

0.25

1.2

60.1

33.3

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021887

11450049 - 11488708

38660

ENSAPLT00000007512

11421673 - 11488708

67036

ENSAPLT00000007366

11404588 - 11488708

84121