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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11452257_11453996_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11452257 - 11453996

Intron Length:

1740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

AATCAAAATTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

ACAATCAAAATT

Flanking Amino Acid:

TVLKRMASLKYAEILEEKID

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

75.2

35.8

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

59.4

0.21

1.1

53.6

44.1

Minor 5ss

46.7

-0.3

2.8

62.5

42.2

Minor BPS

43.7

-0.4

1.8

56.24

40.3

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007366

11404588 - 11488708

84121

ENSAPLT00000021887

11450049 - 11488708

38660

ENSAPLT00000007512

11421673 - 11488708

67036