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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11456217_11460411_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11456217 - 11460411

Intron Length:

4195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGACACGT

5'SS Class:

weak_major

3'SS Sequence:

TTTTAACTGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTCTTTTTAACT

Flanking Amino Acid:

FRFGYDREKRCHEYSEHLNL

Intron Amino Acid Position:

634

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.9

0.04

1.2

47.1

43.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

75.7

0.58

74.7

39.9

Minor 5ss

35.1

-1.7

3.2

44.4

44.1

Minor BPS

1.08

90.89

33.1

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007512

11421673 - 11488708

67036

ENSAPLT00000007366

11404588 - 11488708

84121