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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11458137_11460404_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11458137 - 11460404

Intron Length:

2268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTATAAGGA

5'SS Class:

weak_major

3'SS Sequence:

TGGATTGCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

GTGCTTTGGATT

Flanking Amino Acid:

FGYDREKRVTLQMQDFALGL

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.3

39.3

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

68.3

0.41

1.1

58.3

47.2

Minor 5ss

36.6

-1.5

3.4

44.9

Minor BPS

47.5

-0.1

1.4

60.83

37.2

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021887

11450049 - 11488708

38660