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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11473105_11474116_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11473105 - 11474116

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATT|GCAGGAAGG

5'SS Class:

weak_major

3'SS Sequence:

GTTGCAAACACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TATACAAGAATC

Flanking Amino Acid:

KEINKFEKSIKLKVPTPETT

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.4

42.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

59.7

0.22

51.7

Minor 5ss

23.7

-3

36.5

41.9

Minor BPS

45.5

-0.3

1.9

60.21

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021887

11450049 - 11488708

38660

ENSAPLT00000007512

11421673 - 11488708

67036

ENSAPLT00000007366

11404588 - 11488708

84121