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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11477615_11478975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11477615 - 11478975

Intron Length:

1361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCTAAC

5'SS Class:

major

3'SS Sequence:

AATGTAATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

CTATCTTCAAAT

Flanking Amino Acid:

KSIGSVLYQERLKSLTPRQA

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.2

72.3

39.5

Major BPS

77.3

0.68

81.5

Major PPT

69.7

0.44

64.3

45.2

Minor 5ss

40.2

-1.1

53.5

43.9

Minor BPS

59.1

0.36

1.7

74.39

42.2

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021887

11450049 - 11488708

38660

ENSAPLT00000007512

11421673 - 11488708

67036

ENSAPLT00000007366

11404588 - 11488708

84121