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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11479229_11487793_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11479229 - 11487793

Intron Length:

8565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATCACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATC

Flanking Amino Acid:

QDDFNKFSQSRVASAKLNNF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

80.7

33.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.8

0.4

0.9

62.5

38.5

Minor 5ss

31.4

-2.1

2.4

35.4

40.5

Minor BPS

74.9

0.76

1.1

77.11

33.4

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021887

11450049 - 11488708

38660

ENSAPLT00000007512

11421673 - 11488708

67036

ENSAPLT00000007366

11404588 - 11488708

84121