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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11487897_11488650_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11487897 - 11488650

Intron Length:

754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATAAACAACCTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTATGTTATTC

Flanking Amino Acid:

NGEVRLSRSLVPGSFAEEFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

71.5

33.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

49.4

-0

38.1

38.9

Minor 5ss

-2.5

33.3

41.7

Minor BPS

45.9

-0.3

2.2

60.65

39.2

Associated Gene:

Gene:

SPEF2

Ensembl Gene ID:

ENSAPLG00000007062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021887

11450049 - 11488708

38660

ENSAPLT00000007512

11421673 - 11488708

67036

ENSAPLT00000007366

11404588 - 11488708

84121