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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11565677_11627149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11565677 - 11627149

Intron Length:

61473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

AATCCTGGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

78.6

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

29.8

-2.3

37.3

41.2

Minor BPS

48.3

-0

2.1

70.18

40.3

Associated Gene:

Gene:

PRLR

Ensembl Gene ID:

ENSAPLG00000006942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007238

11564912 - 11658150

93239