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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11636071_11639237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11636071 - 11639237

Intron Length:

3167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTATACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

DPQYVDVTSIVQPGSPVNLT

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.2

0.79

0.9

80.7

35.9

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

PRLR

Ensembl Gene ID:

ENSAPLG00000006942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007238

11564912 - 11658150

93239