Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11644698_11645990_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11644698 - 11645990

Intron Length:

1293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTACCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTATTTTACCA

Flanking Amino Acid:

DPHYVDVTYIVQPDPPVNVT

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.6

0.76

0.9

78.1

39.9

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

62.8

0.4

1.6

75.15

36.6

Associated Gene:

Gene:

PRLR

Ensembl Gene ID:

ENSAPLG00000006942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007238

11564912 - 11658150

93239