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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11652309_11657894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

11652309 - 11657894

Intron Length:

5586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTA

5'SS Class:

major

3'SS Sequence:

TTCATCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTATTTTCATCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.5

39.9

Major BPS

100

1.24

0.5

100

Major PPT

84.9

0.78

0.8

76.8

37.2

Minor 5ss

34.4

-1.8

3.4

47.6

47.8

Minor BPS

55.3

0.24

1.8

76.47

40.3

Associated Gene:

Gene:

PRLR

Ensembl Gene ID:

ENSAPLG00000006942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007238

11564912 - 11658150

93239