Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11663364_11664445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11663364 - 11664445

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTGTTTCTATTT

Flanking Amino Acid:

RQGGGHRLGSVAFRQQKWKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.1

38.4

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

85.6

0.8

0.7

84.8

29.7

Minor 5ss

-2.3

3.5

39.6

45.9

Minor BPS

46.3

-0.2

1.9

63.1

42.3

Associated Gene:

Gene:

AGXT2

Ensembl Gene ID:

ENSAPLG00000006807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007067

11663309 - 11674570

11262