Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11672603_11673582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11672603 - 11673582

Intron Length:

980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAGGGAGA

5'SS Class:

major

3'SS Sequence:

TCATTCTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGTCCTGCAACA

Flanking Amino Acid:

ACVVGAAVLDAIEEDHLQKN

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

62.6

43.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

68.9

0.43

0.9

62.5

38.6

Minor 5ss

32.7

-2

3.5

43.1

44.6

Minor BPS

48.1

-0.1

2.2

65.91

40.4

Associated Gene:

Gene:

AGXT2

Ensembl Gene ID:

ENSAPLG00000006807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007067

11663309 - 11674570

11262