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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11682062_11686262_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11682062 - 11686262

Intron Length:

4201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATT

Flanking Amino Acid:

FGYSQSDYDTVVHPFYAYWQ

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

74.7

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.4

0.62

73.6

40.4

Minor 5ss

34.2

-1.8

2.9

42.9

43.6

Minor BPS

78.6

0.98

86.64

33.8

Associated Gene:

Gene:

DNAJC21

Ensembl Gene ID:

ENSAPLG00000006757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007018

11676797 - 11691186

14390