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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11687405_11690695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11687405 - 11690695

Intron Length:

3291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

GAATTTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

GTTTCCTTATGT

Flanking Amino Acid:

DVLSDPQERAWYDNHREALL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.5

41.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

66.3

0.37

1.1

66.3

44.7

Minor 5ss

30.6

-2.2

2.9

38.2

41.8

Minor BPS

66.4

0.59

1.9

84.73

41.8

Associated Gene:

Gene:

DNAJC21

Ensembl Gene ID:

ENSAPLG00000006757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007018

11676797 - 11691186

14390