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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11694930_11695572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11694930 - 11695572

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTCAG

5'SS Class:

strong_major

3'SS Sequence:

ATATCTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTGTAAATAACT

Flanking Amino Acid:

RKDKLFVINEVCEMKNCNKC

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

70.7

41.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

71.6

0.49

70.4

40.4

Minor 5ss

33.6

-1.9

2.9

45.3

Minor BPS

53.3

0.18

2.1

79.64

41.6

Associated Gene:

Gene:

BRIX1

Ensembl Gene ID:

ENSAPLG00000006647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006895

11692524 - 11696989

4466