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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11719877_11720385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11719877 - 11720385

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGTGTAT

5'SS Class:

major

3'SS Sequence:

TCTTTTTGCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATCATGCATT

Flanking Amino Acid:

HNKELQDKLQERTPKEVDSA

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

64.5

37.7

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

82.4

0.73

0.8

79.1

32.9

Minor 5ss

31.6

-2.1

3.6

49.3

Minor BPS

48.7

-0

2.1

75.16

41.4

Associated Gene:

Gene:

RAI14

Ensembl Gene ID:

ENSAPLG00000006444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019039

11714084 - 11788824

74741

ENSAPLT00000006694

11714084 - 11777002

62919