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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11720902_11721606_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11720902 - 11721606

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCATGTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTAAAAT

Flanking Amino Acid:

GKGQAFFADQQEEFSSLLRD

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.1

0.57

0.9

72.4

37.4

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

58.3

0.34

1.7

77.19

39.4

Associated Gene:

Gene:

RAI14

Ensembl Gene ID:

ENSAPLG00000006444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019039

11714084 - 11788824

74741

ENSAPLT00000006694

11714084 - 11777002

62919