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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11721685_11723448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11721685 - 11723448

Intron Length:

1764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTATC

5'SS Class:

strong_major

3'SS Sequence:

TAATCTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTATATATAATC

Flanking Amino Acid:

DTKSPTKSKQLSDLSSPRSS

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

79.8

33.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

82.4

0.73

0.9

76.5

Minor 5ss

46.5

-0.4

2.5

63.1

41.4

Minor BPS

0.14

1.7

69.21

Associated Gene:

Gene:

RAI14

Ensembl Gene ID:

ENSAPLG00000006444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019039

11714084 - 11788824

74741

ENSAPLT00000006694

11714084 - 11777002

62919