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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11723478_11724145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11723478 - 11724145

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTAAG

5'SS Class:

major

3'SS Sequence:

TTTTGCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTGTTCTTAATT

Flanking Amino Acid:

LVSSKLSQDVDTKSPTKSKQ

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

43.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

85.2

0.79

0.8

32.1

Minor 5ss

33.6

-1.9

2.9

33.3

41.9

Minor BPS

83.4

1.13

91.18

32.6

Associated Gene:

Gene:

RAI14

Ensembl Gene ID:

ENSAPLG00000006444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006694

11714084 - 11777002

62919

ENSAPLT00000019039

11714084 - 11788824

74741