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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11724325_11726729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11724325 - 11726729

Intron Length:

2405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCAG

5'SS Class:

major

3'SS Sequence:

TTCTTTTGTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTCTTGATAATT

Flanking Amino Acid:

ADVNTRDKNGRTALMMACEA

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

44.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.81

0.8

80.2

37.3

Minor 5ss

28.4

-2.5

3.5

37.7

47.1

Minor BPS

49.7

0.06

2.3

75.84

41.6

Associated Gene:

Gene:

RAI14

Ensembl Gene ID:

ENSAPLG00000006444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019039

11714084 - 11788824

74741

ENSAPLT00000006694

11714084 - 11777002

62919