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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11729083_11731227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11729083 - 11731227

Intron Length:

2145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

CTGAACTATACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CCTTTCTGAACT

Flanking Amino Acid:

HPDCIKRLLQSKCSVDSTDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

82.1

0.8

71.6

36.4

Major PPT

65.5

0.35

57.8

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

69.2

0.68

1.5

80.07

42.1

Associated Gene:

Gene:

RAI14

Ensembl Gene ID:

ENSAPLG00000006444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006694

11714084 - 11777002

62919

ENSAPLT00000019039

11714084 - 11788824

74741