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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11733114_11749781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11733114 - 11749781

Intron Length:

16668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TGCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TGTAACAGAACA

Flanking Amino Acid:

ATKQDSEGKTAFHLAATKGH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.4

42.7

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

81.7

0.71

0.8

37.3

Minor 5ss

34.5

-1.8

2.9

36.7

40.6

Minor BPS

47.6

-0.1

1.9

64.77

40.3

Associated Gene:

Gene:

RAI14

Ensembl Gene ID:

ENSAPLG00000006444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019039

11714084 - 11788824

74741

ENSAPLT00000006694

11714084 - 11777002

62919