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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11842244_11843499_F

Intron Information:

Intron Rank:

148186

Intron Class:

major

Intron Phase:

Intron Coordinates:

11842244 - 11843499

Intron Length:

1256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTGGGATTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

90.6

0.91

0.7

88.7

28.3

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

41.2

-0.5

2.2

57.09

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019005

11834166 - 11843603

9438