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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11889440_11892011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11889440 - 11892011

Intron Length:

2572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTGT

5'SS Class:

major

3'SS Sequence:

CCTGTACTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

TTATACTTAAGT

Flanking Amino Acid:

GHDINYVALSGVLSKLGRKS

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

69.7

43.7

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

67.7

0.4

59.2

40.8

Minor 5ss

0.14

2.6

74.1

42.2

Minor BPS

68.9

0.67

1.8

86.1

39.5

Associated Gene:

Gene:

AMACR

Ensembl Gene ID:

ENSAPLG00000030697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031947

11886767 - 11906403

19637