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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11892173_11896978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11892173 - 11896978

Intron Length:

4806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTTTGTGTATCT

Flanking Amino Acid:

GKGQIIDASMVEGIAYISSF

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

77.7

0.62

0.9

73.8

41.4

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

47.8

-0

2.5

79.06

43.7

Associated Gene:

Gene:

AMACR

Ensembl Gene ID:

ENSAPLG00000030697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031947

11886767 - 11906403

19637