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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11917330_11917967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11917330 - 11917967

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TCTTTTGTGACC

Flanking Amino Acid:

MLFFTDFMGQVVYRGSPYAP

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

80.5

0.69

0.9

77.4

36.9

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

52.5

0.06

68.18

38.4

Associated Gene:

Gene:

SLC45A2

Ensembl Gene ID:

ENSAPLG00000003346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003408

11908420 - 11923322

14903