Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_11947157_11951887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11947157 - 11951887

Intron Length:

4731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCGGT

5'SS Class:

major

3'SS Sequence:

CTGTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTTAC

U12 Branch Point Sequence:

CTTACCCTAGTT

Flanking Amino Acid:

GGSPFPDGRQEQFIKTLQEY

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

67.1

44.6

Major BPS

61.4

0.28

33.7

Major PPT

83.8

0.76

0.8

81.1

30.9

Minor 5ss

33.5

-1.9

3.3

47.8

47.7

Minor BPS

50.6

0.1

73.5

43.5

Associated Gene:

Gene:

ADAMTS12

Ensembl Gene ID:

ENSAPLG00000002467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027015

11945758 - 12116274

170517

ENSAPLT00000002531

11945758 - 12116274

170517