Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1197617_1197701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1197617 - 1197701

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCGTGTCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GCTCCCTGGAGC

Flanking Amino Acid:

EYAEQEARRKERLVVENEDW

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

0.49

0.9

68.5

37.3

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

47.9

-0.1

1.8

56.9

41.7

Associated Gene:

Gene:

GALT

Ensembl Gene ID:

ENSAPLG00000025606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040158

1196436 - 1199666

3231

ENSAPLT00000037070

1196436 - 1203052

6617