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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1202889_1203018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1202889 - 1203018

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGGG

5'SS Class:

major

3'SS Sequence:

GTGCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

ATGCTCAGAGCC

Flanking Amino Acid:

GTAVDTGGHSGRYWADISDT

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

47.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

68.5

0.42

0.9

61.8

34.8

Minor 5ss

30.3

-2.3

3.3

43.1

Minor BPS

42.4

-0.5

1.8

52.15

38.5

Associated Gene:

Gene:

SIGMAR1

Ensembl Gene ID:

ENSAPLG00000007859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008150

1199154 - 1203567

4414