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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1203112_1203340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1203112 - 1203340

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATCAAT

U12 Branch Point Sequence:

GCTTCTGGGATC

Flanking Amino Acid:

GTTRSEIYYPGDTIVHQAGE

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.9

39.6

Major BPS

51.3

0.03

1.4

62.7

41.6

Major PPT

76.1

0.59

72.9

42.2

Minor 5ss

40.1

-1.1

2.8

45.2

Minor BPS

44.1

-0.4

2.1

54.2

38.6

Associated Gene:

Gene:

SIGMAR1

Ensembl Gene ID:

ENSAPLG00000007859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008150

1199154 - 1203567

4414